BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015C07SP1|AL426819
(975 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1373 1901 0.0
>3x_Contig1373
Length = 6197
Score = 1901 bits (957), Expect = 0.0
Identities = 969/975 (99%)
Strand = Plus / Minus
Query: 1 agactggatccttcgtcggtatgccatcaaattgggagaaattattgaagcattctagat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3571 agactggatccttcgtcggtatgccatcaaattgggagaaattattgaagcattctagaa 3512
Query: 61 ttacaggtgaagactggaataataattcggctgctgttattcaagtactacaattctacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3511 ttacaggtgaagactggaataataattcggctgctgttattcaagtactacaattctacc 3452
Query: 121 aagagtataacggcgtaaatcaatcaagtgcctcgctgccaccttctgcatcctctgcga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3451 aagagtataacggcgtaaatcaatcaagtgcctcgctgccaccttctgcatcctctgcga 3392
Query: 181 ctccgtctccctcgacgaatactctaccaacaatcgcgaagaataatttccatgcaactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3391 ctccgtctccctcgacgaatactctaccaacaatcgcgaagaataatttccatgcaactt 3332
Query: 241 tgcagtcgaatggtagtggtggtagcagttctggttcttccacttcaagtttcaatcata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3331 tgcagtcgaatggtagtggtggtagcagttctggttcttccacttcaagtttcaatcata 3272
Query: 301 ataacttcaacaacagcagcacaaatgttgatgctgcgaggtcagatcatggtaagaatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3271 ataacttcaacaacagcagcacaaatgttgatgctgcgaggtcagatcatggtaagaatg 3212
Query: 361 aattaattcctcaaaggaaaccaccttccccaccatcttcttcttccagcaacgtacatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3211 aattaattcctcaaaggaaaccaccttccccaccatcttcttcttccagcaacgtacatc 3152
Query: 421 ccaacgttgagatctcaaaggcttctccaaataatcatggccctaaagtagctcagcagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3151 ccaacgttgagatctcaaaggcttctccaaataatcatggccctaaagtagctcagcagt 3092
Query: 481 acgtgccctcacctcaacatactcaacggaagccattggcatctttgcacaatatggcga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3091 acgtgccctcacctcaacatactcaacggaagccattggcatctttgcacaatatggcga 3032
Query: 541 atccatactcaaggacaaaggctggccccactgttcgtcaacaagtatcaactcaaccgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3031 atccatactcaaggacaaaggctggccccactgttcgtcaacaagtatcaactcaaccgt 2972
Query: 601 actcataccaacaacagcaaccaaaacaaaactaccagcaatctttgcaacagcaacagc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2971 actcataccaacaacagcaaccaaaacaaaactaccagcaatctttgcaacagcaacagc 2912
Query: 661 agctagctaacagacaacaaacaccagctaaatacccgactgatggcccaaatgtttctc 720
||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 2911 agcaagctaacagacaacaaacaccagcaaaatacccgactgatggcccaaatgtttctc 2852
Query: 721 caagagatcagaatcataaaccaccttctccccagaaccacaatcaatatcagcacaatt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2851 caagagatcagaatcataaaccaccttctccccagaaccacaatcaatatcagcacaatt 2792
Query: 781 taaagcaaccacagcaacagcaacagaaacaacttatacaacaacatacagtggctattc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2791 taaagcaaccacagcaacagcaacagaaacaacttatacaacaacatacagtggctattc 2732
Query: 841 cacctaggatgcatcctcagcgtattgccagtkacagaagtyaaaatcaacccaaacctg 900
|||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 2731 cacctaggatgcatcctcagcgtattgccagtgacagaagtcaaaatcaacccaaacctg 2672
Query: 901 gtatgcaaccattgatccaagtgactwcttcacaaaataaacaaccatctccaagtcaat 960
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2671 gtatgcaaccattgatccaagtgactacttcacaaaataaacaaccatctccaagtcaat 2612
Query: 961 ctgctgcacagatgg 975
|||||||||||||||
Sbjct: 2611 ctgctgcacagatgg 2597
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8344
Number of Sequences: 1807
Number of extensions: 8344
Number of successful extensions: 155
Number of sequences better than 1.0e-20: 1
length of query: 975
length of database: 10,358,551
effective HSP length: 16
effective length of query: 959
effective length of database: 10,329,639
effective search space: 9906123801
effective search space used: 9906123801
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)